Lecture : DNA Barcoding and Forensic

 

JADUAL KULIAH MK TEKNIK ANALISIS DNA FORENSIK DAN BARCODING

PASCASARJANA BIOLOGI FMIPA UB MALANG

Pertemuan ke

Sub pokok bahasan

Metoda pembelajaran

Dosen
1 Overview DNA Fingerprinting & DNA typing on Forensic Biology Lecture F
2 Genetic basis  of DNA typing (genomic or mtDNA) Lecture F
3 Forensic DNA typing system (CODIS, Y-chromosome, SNP, STR, SSP, DDGE) discussion of articles on forensic DNA testing F
4 Sample collection. extraction, purification, & storage Practice F/NK
5 DNA preparation and Sequensing Practice F/NK
6 Bioinformatic Analysis: DNA Seq analysis, alignment, phylogenetic tree Practice, online F/NK
7 Molecular data Interpretation (UPGM, stat analysis, Clad) Practice, online F/NK
8 Middle test
9 Biomarker for animal DNA Barcoding analysis Lecture NK
10 DNA Barcoding analysis on animal molecular biodiversity and taxonomy discussion of articles on insect DNA Barcoding NK
11 DNA Barcoding analysis on animal molecular biodiversity and taxonomy discussion of articles on insect DNA Barcoding NK
12 Biomarker for microbe DNA Barcoding analysis Lecture SH
12 DNA Barcoding analysis on molecular biodiversity and taxonomy of microbe discussion of articles on microbe DNA typing & Barcoding SH
14 Biomarker for plant DNA Fingertyping and Barcoding analysis Lecture ELA
15 DNA Fingerprinting analayis on molecular biodiversity and taxonomy of plant discussion of articles on Plant DNA Fingerprinting ELA
16 DNA Fingerprinting analayis on molecular biodiversity and taxonomy of plant discussion of articles on Plant DNA Fingerprinting ELA

Tim Dosen:

Fatchiyah, M.Kes., PhD. (F, Koordinator), Dr.Ir.Estri Laras Arumingtyas, MScSt (ELA), Dr.Suharjono, MS (SH), dan Nia Kurniawan, MP, Ph.D. (NK)

Acuan Bacaan

Bashinski, J. “Laboratory Standards: Accreditation, Training, and Certification of Staff in the Forensic Context.” p. 159-173. Ballantyne J, Sensabaugh G. DNA Technology and Forensic Science, Cold Spring Harbor, NY: Cold Spring Harbor Press, 1989.

Balke,  M. and Schmidt S. 2012. Training of Trainers and Students Module II: DNA Barcoding Course material. Implementation of  Indonesian-German Network for Teaching, Training and Research Collaborations (IGN-TTRC) UB Councils. Zoologische Staatssammlung, Munchen. German

Hughey, J. Bio 13- Introduction To Forensic DNA Analysis Lecture Manual: Section 5052, Fall 2011.

Kobilinsky, L., Liotti, T. F. & Oeser-Sweat, J. DNA: Forensic and Legal Applications. Wiley-Interscience, New Jersey, 2004.  ISBN: 0471414786.

Kirby, L.T. 1990. DNA Fingerprinting: An Introduction.     W. H. Freeman.

Krawczak, M. & J. Schmidtke. 1994. DNA Fingerprinting.  Books International, Inc.

Moriniere, Jerome. 2012. Apractical lab manual for  molecularphylogenetics, barcoding and friends. Bavarian state collection of zoology. Zoologische Staatssammlung, Munchen. German

OSHA Bloodborne Pathogen Standard. 1992. Fisher Scientific.

Saferstein, R. 2001. Forensic Science Handbook.  Prentice Hall

Weedn VW, Roby RK. Forensic DNA Testing. Arch Pathol Lab Med 1993;117:486-491

 

Material Lecture:

1.   Lecture DNA Barcode (taxmol or molEvo)

2. Lecture Intro Forensic Science DNA Testing

 

Weblink:

http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0014448

http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0028832

http://fatchiyah.lecture.ub.ac.id/publication-2/

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